IL_7Z3O_151

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7Z3O|1|2|U|167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_151 not in the Motif Atlas

Homologous match to IL_4V88_394

Geometric discrepancy: 0.1663

The information below is about IL_4V88_394

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.3

Basepair signature

cWW-cWW-tWH-tWH-tHW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

7Z3O|1|2|G|140
7Z3O|1|2|G|141
7Z3O|1|2|A|142
7Z3O|1|2|U|143
7Z3O|1|2|A|144
7Z3O|1|2|A|145
7Z3O|1|2|C|146
*
7Z3O|1|2|G|162
7Z3O|1|2|C|163
7Z3O|1|2|U|164
7Z3O|1|2|A|165
7Z3O|1|2|A|166
7Z3O|1|2|U|167
7Z3O|1|2|A|168
7Z3O|1|2|C|169

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LW

eL24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24