3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GGAU*GCAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_192 not in the Motif Atlas
Homologous match to IL_4V88_438
Geometric discrepancy: 0.1287
The information below is about IL_4V88_438
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_67085.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
55

Unit IDs

7Z3O|1|2|G|1039
7Z3O|1|2|G|1040
7Z3O|1|2|A|1041
7Z3O|1|2|U|1042
*
7Z3O|1|2|G|1071
7Z3O|1|2|C|1072
7Z3O|1|2|A|1073
7Z3O|1|2|C|1074

Current chains

Chain 2
18S rRNA

Nearby chains

Chain SA
40S ribosomal protein S0
Chain SB
40S ribosomal protein S1
Chain SN
40S ribosomal protein S13-like protein
Chain Sa
40S ribosomal protein S26

Coloring options:


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