3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CG*CAG
Length
5 nucleotides
Bulged bases
7Z3O|1|2|A|1423
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_206 not in the Motif Atlas
Homologous match to IL_4V88_452
Geometric discrepancy: 0.25
The information below is about IL_4V88_452
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
127

Unit IDs

7Z3O|1|2|C|1277
7Z3O|1|2|G|1278
*
7Z3O|1|2|C|1422
7Z3O|1|2|A|1423
7Z3O|1|2|G|1424

Current chains

Chain 2
18S rRNA

Nearby chains

Chain SC
40S ribosomal protein S2-like protein
Chain SD
40S ribosomal protein S3-like protein
Chain SQ
40S ribosomal protein S16-like protein
Chain SU
40S ribosomal protein S20-like protein
Chain Sd
Ribosomal protein uS14

Coloring options:


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