IL_7Z3O_211

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CC*GCCG

Length

6 nucleotides

Bulged bases

7Z3O|1|2|C|1369, 7Z3O|1|2|C|1370

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_211 not in the Motif Atlas

Geometric match to IL_5XWP_001

Geometric discrepancy: 0.1617

The information below is about IL_5XWP_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

7Z3O|1|2|C|1348
7Z3O|1|2|C|1349
*
7Z3O|1|2|G|1368
7Z3O|1|2|C|1369
7Z3O|1|2|C|1370
7Z3O|1|2|G|1371

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SQ

40S ribosomal protein S16-like protein

Chain SU

40S ribosomal protein S20-like protein