IL_7Z3O_214

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUUG*CCGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_214 not in the Motif Atlas

Geometric match to IL_8D29_010

Geometric discrepancy: 0.3292

The information below is about IL_8D29_010

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

7Z3O|1|2|C|1490
7Z3O|1|2|C|1491
7Z3O|1|2|U|1492
7Z3O|1|2|U|1493
7Z3O|1|2|G|1494
*
7Z3O|1|2|C|1505
7Z3O|1|2|C|1506
7Z3O|1|2|G|1507
7Z3O|1|2|G|1508
7Z3O|1|2|G|1509

Current chains

Chain 2

18S rRNA

Nearby chains

Chain ST

40S ribosomal protein S19-like protein