IL_7Z3O_217

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_217 not in the Motif Atlas

Homologous match to IL_4V88_464

Geometric discrepancy: 0.1404

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7Z3O|1|2|G|1634
7Z3O|1|2|C|1635
7Z3O|1|2|C|1636
7Z3O|1|2|C|1637
*
7Z3O|1|2|G|1756
7Z3O|1|2|U|1757
7Z3O|1|2|A|1758
7Z3O|1|2|A|1759
7Z3O|1|2|C|1760

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain B

HABP4_PAI-RBP1 domain-containing protein

Chain Ln

60S ribosomal protein L41-A