IL_7Z3O_227

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGAC*GAAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_227 not in the Motif Atlas

Geometric match to IL_4V88_474

Geometric discrepancy: 0.1575

The information below is about IL_4V88_474

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_95716.2

Basepair signature

cWW-cWW-tHS-tHS-tSH-cWW

Number of instances in this motif group

18

Unit IDs

7Z3O|1|2|C|1674
7Z3O|1|2|G|1675
7Z3O|1|2|G|1676
7Z3O|1|2|A|1677
7Z3O|1|2|C|1678
*
7Z3O|1|2|G|1715
7Z3O|1|2|A|1716
7Z3O|1|2|A|1717
7Z3O|1|2|A|1718
7Z3O|1|2|G|1719

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LW

eL24

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8