IL_7Z3O_277

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAG*CACU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_277 not in the Motif Atlas

Geometric match to IL_1MFQ_004

Geometric discrepancy: 0.2277

The information below is about IL_1MFQ_004

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

7Z3O|1|2|A|1687
7Z3O|1|2|G|1688
7Z3O|1|2|A|1689
7Z3O|1|2|G|1690
*
7Z3O|1|2|C|1703
7Z3O|1|2|A|1704
7Z3O|1|2|C|1705
7Z3O|1|2|U|1706

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C

Putative ribosome associated protein

Chain LW

eL24

Chain SG

40S ribosomal protein S6