IL_7ZJW_025
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUC*GCUAC
- Length
- 9 nucleotides
- Bulged bases
- 7ZJW|1|L5|A|1247
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_025 not in the Motif Atlas
- Geometric match to IL_3MEI_004
- Geometric discrepancy: 0.2986
- The information below is about IL_3MEI_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7ZJW|1|L5|G|443
7ZJW|1|L5|G|444
7ZJW|1|L5|U|445
7ZJW|1|L5|C|446
*
7ZJW|1|L5|G|1244
7ZJW|1|L5|C|1245
7ZJW|1|L5|U|1246
7ZJW|1|L5|A|1247
7ZJW|1|L5|C|1248
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Lh
- 60S ribosomal protein eL32
- Chain Li
- 60S ribosomal protein eL33
Coloring options: