IL_7ZJW_029

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7ZJW|1|L5|U|467, 7ZJW|1|L5|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|A|466
7ZJW|1|L5|U|467
7ZJW|1|L5|U|468
7ZJW|1|L5|C|469
7ZJW|1|L5|A|470
7ZJW|1|L5|A|471
7ZJW|1|L5|C|472
*
7ZJW|1|L5|G|676
7ZJW|1|L5|C|677
7ZJW|1|L5|G|678
7ZJW|1|L5|C|679
7ZJW|1|L5|A|680
7ZJW|1|L5|U|681
7ZJW|1|L5|U|682
7ZJW|1|L5|U|683

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L6

Chain Ls

60S ribosomal protein eL28