IL_7ZJW_057
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAUC*GCGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_057 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.3017
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_97631.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ZJW|1|L5|G|1380
7ZJW|1|L5|G|1381
7ZJW|1|L5|A|1382
7ZJW|1|L5|U|1383
7ZJW|1|L5|C|1384
*
7ZJW|1|L5|G|1410
7ZJW|1|L5|C|1411
7ZJW|1|L5|G|1412
7ZJW|1|L5|C|1413
7ZJW|1|L5|A|1414
7ZJW|1|L5|C|1415
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LT
- 60S ribosomal Protein eL18
- Chain Le
- 60S ribosomal protein L29
Coloring options: