IL_7ZJW_071
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUG*CUAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_071 not in the Motif Atlas
- Homologous match to IL_8GLP_064
- Geometric discrepancy: 0.0695
- The information below is about IL_8GLP_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16315.2
- Basepair signature
- cWW-cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7ZJW|1|L5|C|1641
7ZJW|1|L5|U|1642
7ZJW|1|L5|G|1643
*
7ZJW|1|L5|C|1787
7ZJW|1|L5|U|1788
7ZJW|1|L5|A|1789
7ZJW|1|L5|G|1790
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LO
- 60S ribosomal protein eL13
- Chain LT
- 60S ribosomal Protein eL18
- Chain LW
- 60S ribosomal protein eL21
- Chain Ld
- 60S ribosomal protein L27a
- Chain Le
- 60S ribosomal protein L29
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