IL_7ZJW_246
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGC*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_246 not in the Motif Atlas
- Geometric match to IL_4LFB_006
- Geometric discrepancy: 0.1265
- The information below is about IL_4LFB_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7ZJW|1|S2|C|878
7ZJW|1|S2|G|879
7ZJW|1|S2|C|880
*
7ZJW|1|S2|G|908
7ZJW|1|S2|A|909
7ZJW|1|S2|G|910
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LU
- 60S ribosomal protein L19
- Chain SS
- 40S ribosomal protein S7
Coloring options: