IL_7ZJW_270
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- ACA*UUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_270 not in the Motif Atlas
- Geometric match to IL_4V88_448
- Geometric discrepancy: 0.235
- The information below is about IL_4V88_448
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30342.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7ZJW|1|S2|A|1292
7ZJW|1|S2|C|1293
7ZJW|1|S2|A|1294
*
7ZJW|1|S2|U|1307
7ZJW|1|S2|U|1308
7ZJW|1|S2|U|1309
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain B
- SECIS Binding Protein 2
- Chain E
- eEFSec
- Chain S
- Selenocysteine insertion sequence 1; SECIS_1
- Chain SD
- 40S ribosomal protein S27a
- Chain SH
- 40S ribosomal protein uS14
- Chain Sa
- 40S ribosomal protein uS19
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