IL_7ZJW_313
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCC*GAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_313 not in the Motif Atlas
- Geometric match to IL_7ECK_015
- Geometric discrepancy: 0.1766
- The information below is about IL_7ECK_015
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7ZJW|1|L5|G|1700
7ZJW|1|L5|C|1701
7ZJW|1|L5|C|1702
*
7ZJW|1|L5|G|1708
7ZJW|1|L5|A|1709
7ZJW|1|L5|U|1710
Current chains
- Chain L5
- 28S rRNA
Nearby chains
No other chains within 10ÅColoring options: