IL_7ZJW_322
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAAGUCGG*CUGU(OMC)
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJW_322 not in the Motif Atlas
- Homologous match to IL_8P9A_305
- Geometric discrepancy: 0.0648
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
7ZJW|1|L5|G|2690
7ZJW|1|L5|G|2691
7ZJW|1|L5|A|2692
7ZJW|1|L5|A|2693
7ZJW|1|L5|G|2694
7ZJW|1|L5|U|2695
7ZJW|1|L5|C|2696
7ZJW|1|L5|G|2697
7ZJW|1|L5|G|2698
*
7ZJW|1|L5|C|3569
7ZJW|1|L5|U|3570
7ZJW|1|L5|G|3571
7ZJW|1|L5|U|3572
7ZJW|1|L5|OMC|3573
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LY
- 60S ribosomal protein L23
Coloring options: