IL_7ZJX_173
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(PSU)U*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7ZJX|1|L5|G|4788
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZJX_173 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.3583
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7ZJX|1|L5|G|4739
7ZJX|1|L5|PSU|4740
7ZJX|1|L5|U|4741
*
7ZJX|1|L5|G|4784
7ZJX|1|L5|U|4785
7ZJX|1|L5|C|4786
7ZJX|1|L5|A|4787
7ZJX|1|L5|G|4788
7ZJX|1|L5|C|4789
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein uL3
- Chain LZ
- Ribosomal protein L24
- Chain Lg
- 60S ribosomal protein L31
Coloring options: