IL_7ZP8_009
3D structure
- PDB id
- 7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZP8_009 not in the Motif Atlas
- Homologous match to IL_8VTW_004
- Geometric discrepancy: 0.5801
- The information below is about IL_8VTW_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
7ZP8|1|b|G|81
7ZP8|1|b|U|82
7ZP8|1|b|A|83
7ZP8|1|b|A|84
7ZP8|1|b|G|85
*
7ZP8|1|b|C|97
7ZP8|1|b|G|98
7ZP8|1|b|U|99
7ZP8|1|b|U|100
7ZP8|1|b|A|101
7ZP8|1|b|U|102
7ZP8|1|b|A|103
7ZP8|1|b|A|104
7ZP8|1|b|C|105
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain u
- 50S ribosomal protein L24
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