IL_7ZP8_014

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZP8_014 not in the Motif Atlas

Geometric match to IL_4WF9_014

Geometric discrepancy: 0.1658

The information below is about IL_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

7ZP8|1|b|U|293
7ZP8|1|b|A|294
7ZP8|1|b|G|295
*
7ZP8|1|b|C|343
7ZP8|1|b|A|344
7ZP8|1|b|A|345
7ZP8|1|b|A|346
7ZP8|1|b|A|347

Current chains

Chain b

23S rRNA

Nearby chains

Chain u

50S ribosomal protein L24