IL_7ZP8_025
3D structure
- PDB id
- 7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7ZP8|1|b|G|776, 7ZP8|1|b|A|788, 7ZP8|1|b|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZP8_025 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0882
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZP8|1|b|G|775
7ZP8|1|b|G|776
7ZP8|1|b|G|777
*
7ZP8|1|b|C|787
7ZP8|1|b|A|788
7ZP8|1|b|A|789
7ZP8|1|b|U|790
7ZP8|1|b|C|791
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain c
- 50S ribosomal protein L2
- Chain s
- 50S ribosomal protein L22
- Chain z
- Gelation factor
Coloring options: