IL_7ZP8_107
3D structure
- PDB id
- 7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUGAUU*AUCACC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZP8_107 not in the Motif Atlas
- Geometric match to IL_4LFB_030
- Geometric discrepancy: 0.3513
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7ZP8|1|v|G|2
7ZP8|1|v|U|3
7ZP8|1|v|G|4
7ZP8|1|v|A|5
7ZP8|1|v|U|6
7ZP8|1|v|U|7
*
7ZP8|1|v|A|66
7ZP8|1|v|U|67
7ZP8|1|v|C|68
7ZP8|1|v|A|69
7ZP8|1|v|C|70
7ZP8|1|v|C|71
Current chains
- Chain v
- Pro-tRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain m
- 50S ribosomal protein L16
- Chain y
- 50S ribosomal protein L27
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