IL_7ZPQ_013
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CGACC*GGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_013 not in the Motif Atlas
- Geometric match to IL_8GLP_204
- Geometric discrepancy: 0.3564
- The information below is about IL_8GLP_204
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.5
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
7ZPQ|1|2|C|186
7ZPQ|1|2|G|187
7ZPQ|1|2|A|188
7ZPQ|1|2|C|189
7ZPQ|1|2|C|190
*
7ZPQ|1|2|G|195
7ZPQ|1|2|G|196
7ZPQ|1|2|A|197
7ZPQ|1|2|A|198
7ZPQ|1|2|G|199
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AI
- 40S ribosomal protein S8
Coloring options: