IL_7ZPQ_068
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7ZPQ|1|2|A|1427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_068 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.2457
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
7ZPQ|1|2|C|1280
7ZPQ|1|2|G|1281
*
7ZPQ|1|2|C|1426
7ZPQ|1|2|A|1427
7ZPQ|1|2|G|1428
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AC
- RPS2 isoform 1
- Chain AD
- RPS3 isoform 1
- Chain AQ
- 40S ribosomal protein S16-A
- Chain AU
- RPS20 isoform 1
- Chain Ad
- RPS29A isoform 1
Coloring options: