IL_7ZPQ_089
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CUCA*UUUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_089 not in the Motif Atlas
- Homologous match to IL_4V88_473
- Geometric discrepancy: 0.1294
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7ZPQ|1|2|C|1675
7ZPQ|1|2|U|1676
7ZPQ|1|2|C|1677
7ZPQ|1|2|A|1678
*
7ZPQ|1|2|U|1723
7ZPQ|1|2|U|1724
7ZPQ|1|2|U|1725
7ZPQ|1|2|G|1726
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain AG
- 40S ribosomal protein S6-A
- Chain AI
- 40S ribosomal protein S8
- Chain BV
- RPL24A isoform 1
Coloring options: