IL_7ZPQ_187

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

UG*UAAA

Length

6 nucleotides

Bulged bases

7ZPQ|1|5|A|2242, 7ZPQ|1|5|A|2243

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZPQ_187 not in the Motif Atlas

Homologous match to IL_8C3A_090

Geometric discrepancy: 0.0469

The information below is about IL_8C3A_090

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7ZPQ|1|5|U|2200
7ZPQ|1|5|G|2201
*
7ZPQ|1|5|U|2241
7ZPQ|1|5|A|2242
7ZPQ|1|5|A|2243
7ZPQ|1|5|A|2244

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BA

60S ribosomal protein L2-A