IL_7ZPQ_207
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- UCAAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_207 not in the Motif Atlas
- Homologous match to IL_5TBW_106
- Geometric discrepancy: 0.0882
- The information below is about IL_5TBW_106
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7ZPQ|1|5|U|2835
7ZPQ|1|5|C|2836
7ZPQ|1|5|A|2837
7ZPQ|1|5|A|2838
7ZPQ|1|5|G|2839
*
7ZPQ|1|5|C|2849
7ZPQ|1|5|G|2850
7ZPQ|1|5|A|2851
7ZPQ|1|5|C|2852
7ZPQ|1|5|A|2853
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BI
- RPL10 isoform 1
- Chain Bl
- 60S ribosomal protein L40-A
Coloring options: