IL_7ZPQ_234
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 7ZPQ|1|5|G|3369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZPQ_234 not in the Motif Atlas
- Homologous match to IL_8C3A_139
- Geometric discrepancy: 0.0775
- The information below is about IL_8C3A_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
7ZPQ|1|5|U|3332
7ZPQ|1|5|G|3333
7ZPQ|1|5|U|3334
7ZPQ|1|5|A|3335
7ZPQ|1|5|A|3336
7ZPQ|1|5|G|3337
*
7ZPQ|1|5|C|3367
7ZPQ|1|5|U|3368
7ZPQ|1|5|G|3369
7ZPQ|1|5|A|3370
7ZPQ|1|5|G|3371
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BB
- 60S ribosomal protein L3
- Chain BV
- RPL24A isoform 1
Coloring options: