IL_7ZQ5_028

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUC*GAAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_028 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.2186

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

7ZQ5|1|b|A|849
7ZQ5|1|b|U|850
7ZQ5|1|b|C|851
*
7ZQ5|1|b|G|926
7ZQ5|1|b|A|927
7ZQ5|1|b|A|928
7ZQ5|1|b|U|929

Current chains

Chain b

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30