IL_7ZQ5_050

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

7ZQ5|1|b|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_050 not in the Motif Atlas

Geometric match to IL_5J7L_291

Geometric discrepancy: 0.11

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

7ZQ5|1|b|C|1319
7ZQ5|1|b|C|1320
7ZQ5|1|b|A|1321
7ZQ5|1|b|A|1322
7ZQ5|1|b|C|1323
*
7ZQ5|1|b|G|1331
7ZQ5|1|b|G|1332
7ZQ5|1|b|G|1333

Current chains

Chain b

23S rRNA

Nearby chains

Chain s

50S ribosomal protein L22