IL_7ZQ5_056

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

7ZQ5|1|b|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_056 not in the Motif Atlas

Geometric match to IL_5J7L_297

Geometric discrepancy: 0.1635

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7ZQ5|1|b|C|1437
7ZQ5|1|b|U|1438
7ZQ5|1|b|A|1439
7ZQ5|1|b|U|1440
*
7ZQ5|1|b|A|1551
7ZQ5|1|b|A|1552
7ZQ5|1|b|A|1553
7ZQ5|1|b|U|1554
7ZQ5|1|b|G|1555

Current chains

Chain b

23S rRNA

Nearby chains