IL_7ZQ5_069

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZQ5_069 not in the Motif Atlas

Geometric match to IL_7RQB_075

Geometric discrepancy: 0.1603

The information below is about IL_7RQB_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7ZQ5|1|b|U|1720
7ZQ5|1|b|G|1721
7ZQ5|1|b|A|1722
7ZQ5|1|b|A|1723
7ZQ5|1|b|G|1724
*
7ZQ5|1|b|U|1736
7ZQ5|1|b|G|1737
7ZQ5|1|b|G|1738
7ZQ5|1|b|A|1739
7ZQ5|1|b|G|1740

Current chains

Chain b

23S rRNA

Nearby chains