IL_7ZQ5_078
3D structure
- PDB id
- 7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 7ZQ5|1|b|A|1938, 7ZQ5|1|b|U|1944, 7ZQ5|1|b|U|1963
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZQ5_078 not in the Motif Atlas
- Geometric match to IL_4V9F_071
- Geometric discrepancy: 0.1569
- The information below is about IL_4V9F_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
7ZQ5|1|b|C|1934
7ZQ5|1|b|G|1935
7ZQ5|1|b|A|1936
7ZQ5|1|b|A|1937
7ZQ5|1|b|A|1938
7ZQ5|1|b|U|1939
7ZQ5|1|b|U|1940
7ZQ5|1|b|C|1941
7ZQ5|1|b|C|1942
7ZQ5|1|b|U|1943
7ZQ5|1|b|U|1944
7ZQ5|1|b|G|1945
*
7ZQ5|1|b|C|1961
7ZQ5|1|b|C|1962
7ZQ5|1|b|U|1963
7ZQ5|1|b|G|1964
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: