IL_7ZRS_046
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7ZRS|1|2|G|876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_046 not in the Motif Atlas
- Geometric match to IL_4V88_431
- Geometric discrepancy: 0.1019
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7ZRS|1|2|C|874
7ZRS|1|2|G|875
7ZRS|1|2|G|876
7ZRS|1|2|G|877
7ZRS|1|2|G|878
*
7ZRS|1|2|C|950
7ZRS|1|2|A|951
7ZRS|1|2|A|952
7ZRS|1|2|G|953
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AB
- 40S ribosomal protein S1-A
- Chain AN
- 40S ribosomal protein S13
- Chain Aa
- RPS26B isoform 1
Coloring options: