IL_7ZRS_047
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_047 not in the Motif Atlas
- Homologous match to IL_4V88_432
- Geometric discrepancy: 0.0933
- The information below is about IL_4V88_432
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7ZRS|1|2|G|885
7ZRS|1|2|U|886
7ZRS|1|2|A|887
7ZRS|1|2|U|888
*
7ZRS|1|2|A|924
7ZRS|1|2|G|925
7ZRS|1|2|A|926
7ZRS|1|2|C|927
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AB
- 40S ribosomal protein S1-A
- Chain AO
- 40S ribosomal protein S14-B
- Chain Aa
- RPS26B isoform 1
- Chain BA
- 60S ribosomal protein L2-A
Coloring options: