IL_7ZRS_121
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GAAUGUAG*UAUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 7ZRS|1|5|U|535, 7ZRS|1|5|U|559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_121 not in the Motif Atlas
- Homologous match to IL_5TBW_020
- Geometric discrepancy: 0.1116
- The information below is about IL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ZRS|1|5|G|532
7ZRS|1|5|A|533
7ZRS|1|5|A|534
7ZRS|1|5|U|535
7ZRS|1|5|G|536
7ZRS|1|5|U|537
7ZRS|1|5|A|538
7ZRS|1|5|G|539
*
7ZRS|1|5|U|554
7ZRS|1|5|A|555
7ZRS|1|5|U|556
7ZRS|1|5|U|557
7ZRS|1|5|A|558
7ZRS|1|5|U|559
7ZRS|1|5|A|560
7ZRS|1|5|G|561
7ZRS|1|5|C|562
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BL
- 60S ribosomal protein L14-A
- Chain BR
- 60S ribosomal protein L20-A
Coloring options: