IL_7ZRS_140
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_140 not in the Motif Atlas
- Homologous match to IL_8C3A_041
- Geometric discrepancy: 0.0852
- The information below is about IL_8C3A_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93830.3
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7ZRS|1|5|G|992
7ZRS|1|5|A|993
7ZRS|1|5|G|994
7ZRS|1|5|G|995
7ZRS|1|5|U|996
7ZRS|1|5|A|997
7ZRS|1|5|A|998
*
7ZRS|1|5|U|1053
7ZRS|1|5|A|1054
7ZRS|1|5|A|1055
7ZRS|1|5|A|1056
7ZRS|1|5|U|1057
7ZRS|1|5|A|1058
7ZRS|1|5|U|1059
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain BD
- RPL5 isoform 1
- Chain BF
- 60S ribosomal protein L7-A
- Chain BI
- RPL10 isoform 1
- Chain BS
- 60S ribosomal protein L21-A
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