IL_7ZRS_170
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UGAAU*AGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZRS_170 not in the Motif Atlas
- Geometric match to IL_5TBW_067
- Geometric discrepancy: 0.1281
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7ZRS|1|5|U|1646
7ZRS|1|5|G|1647
7ZRS|1|5|A|1648
7ZRS|1|5|A|1649
7ZRS|1|5|U|1650
*
7ZRS|1|5|A|1807
7ZRS|1|5|G|1808
7ZRS|1|5|G|1809
7ZRS|1|5|A|1810
7ZRS|1|5|A|1811
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain BY
- 60S ribosomal protein L27-A
- Chain Bf
- 60S ribosomal protein L34-A
Coloring options: