IL_7ZRS_261

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

7ZRS|1|5|G|1237

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZRS_261 not in the Motif Atlas

Homologous match to IL_8P9A_283

Geometric discrepancy: 0.5364

The information below is about IL_8P9A_283

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16218.3

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7ZRS|1|5|G|1235
7ZRS|1|5|U|1236
7ZRS|1|5|G|1237
7ZRS|1|5|G|1238
7ZRS|1|5|C|1239
*
7ZRS|1|5|G|1251
7ZRS|1|5|A|1252
7ZRS|1|5|A|1253
7ZRS|1|5|U|1254
7ZRS|1|5|C|1255

Current chains

Chain 5

25S ribosomal RNA

Nearby chains