IL_7ZS5_048
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 7ZS5|1|1|U|1191, 7ZS5|1|1|C|1192, 7ZS5|1|1|C|1316, 7ZS5|1|1|A|1318
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZS5_048 not in the Motif Atlas
- Homologous match to IL_8C3A_054
- Geometric discrepancy: 0.1179
- The information below is about IL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7ZS5|1|1|C|1187
7ZS5|1|1|U|1188
7ZS5|1|1|C|1189
7ZS5|1|1|A|1190
7ZS5|1|1|U|1191
7ZS5|1|1|C|1192
7ZS5|1|1|A|1193
7ZS5|1|1|G|1194
*
7ZS5|1|1|C|1314
7ZS5|1|1|U|1315
7ZS5|1|1|C|1316
7ZS5|1|1|A|1317
7ZS5|1|1|A|1318
7ZS5|1|1|G|1319
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain BJ
- 60S ribosomal protein L9-A
- Chain BN
- 60S ribosomal protein L14-A
- Chain BP
- 60S ribosomal protein L16-A
- Chain BT
- 60S ribosomal protein L20-A
- Chain Bn
- 60S ribosomal protein L40-A
Coloring options: