IL_7ZTA_031

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7ZTA|1|16S1|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_031 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0939

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

7ZTA|1|16S1|C|569
7ZTA|1|16S1|G|570
7ZTA|1|16S1|U|571
7ZTA|1|16S1|A|572
7ZTA|1|16S1|A|573
7ZTA|1|16S1|A|574
7ZTA|1|16S1|G|575
*
7ZTA|1|16S1|C|880
7ZTA|1|16S1|G|881

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S121

30S ribosomal protein S12

Chain S171

30S ribosomal protein S17