IL_7ZTA_089

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_089 not in the Motif Atlas

Homologous match to IL_5J7L_263

Geometric discrepancy: 0.0705

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7ZTA|1|23S1|U|703
7ZTA|1|23S1|G|704
7ZTA|1|23S1|A|705
7ZTA|1|23S1|A|706
7ZTA|1|23S1|G|707
*
7ZTA|1|23S1|U|724
7ZTA|1|23S1|G|725
7ZTA|1|23S1|G|726
7ZTA|1|23S1|A|727
7ZTA|1|23S1|G|728

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2