IL_7ZTA_114

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7ZTA|1|23S1|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_114 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.0678

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7ZTA|1|23S1|C|1208
7ZTA|1|23S1|U|1209
7ZTA|1|23S1|G|1210
7ZTA|1|23S1|C|1211
7ZTA|1|23S1|G|1212
7ZTA|1|23S1|A|1213
7ZTA|1|23S1|A|1214
7ZTA|1|23S1|G|1215
*
7ZTA|1|23S1|U|1234
7ZTA|1|23S1|G|1235
7ZTA|1|23S1|G|1236
7ZTA|1|23S1|A|1237
7ZTA|1|23S1|G|1238

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L201

50S ribosomal protein L20