IL_7ZTA_118

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_118 not in the Motif Atlas

Homologous match to IL_5J7L_292

Geometric discrepancy: 0.0701

The information below is about IL_5J7L_292

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7ZTA|1|23S1|C|1351
7ZTA|1|23S1|U|1352
7ZTA|1|23S1|A|1353
7ZTA|1|23S1|A|1354
7ZTA|1|23S1|G|1355
*
7ZTA|1|23S1|C|1376
7ZTA|1|23S1|G|1377
7ZTA|1|23S1|A|1378
7ZTA|1|23S1|U|1379
7ZTA|1|23S1|G|1380

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2

Chain L341

50S ribosomal protein L34