IL_7ZTA_150

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

7ZTA|1|23S1|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_150 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.0862

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

7ZTA|1|23S1|A|2070
7ZTA|1|23S1|A|2071
*
7ZTA|1|23S1|U|2438
7ZTA|1|23S1|A|2439
7ZTA|1|23S1|C|2440
7ZTA|1|23S1|U|2441

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2

Chain PTR1

Transfer RNA; tRNA