IL_7ZTA_155

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_155 not in the Motif Atlas

Homologous match to IL_3U4M_002

Geometric discrepancy: 0.2038

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

7ZTA|1|23S1|G|2110
7ZTA|1|23S1|U|2111
7ZTA|1|23S1|G|2112
7ZTA|1|23S1|U|2113
7ZTA|1|23S1|A|2114
7ZTA|1|23S1|G|2115
7ZTA|1|23S1|G|2116
7ZTA|1|23S1|A|2117
7ZTA|1|23S1|U|2118
7ZTA|1|23S1|A|2119
7ZTA|1|23S1|G|2120
*
7ZTA|1|23S1|C|2178
7ZTA|1|23S1|C|2179

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain ETR1

Transfer RNA; tRNA