IL_7ZTA_177

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

7ZTA|1|23S1|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_177 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.0638

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7ZTA|1|23S1|G|2737
7ZTA|1|23S1|A|2738
7ZTA|1|23S1|U|2739
7ZTA|1|23S1|A|2740
7ZTA|1|23S1|A|2741
7ZTA|1|23S1|G|2742
*
7ZTA|1|23S1|C|2762
7ZTA|1|23S1|G|2763
7ZTA|1|23S1|A|2764
7ZTA|1|23S1|A|2765
7ZTA|1|23S1|A|2766
7ZTA|1|23S1|C|2767

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L061

50S ribosomal protein L6

Chain L131

50S ribosomal protein L13

Chain L361

50S ribosomal protein L36