IL_7ZTA_191

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZTA_191 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0809

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7ZTA|1|23S1|U|1851
7ZTA|1|23S1|U|1852
7ZTA|1|23S1|A|1853
7ZTA|1|23S1|A|1854
7ZTA|1|23S1|U|1855
7ZTA|1|23S1|U|1856
7ZTA|1|23S1|G|1857
7ZTA|1|23S1|A|1858
7ZTA|1|23S1|U|1859
7ZTA|1|23S1|G|1860
*
7ZTA|1|23S1|U|1882
7ZTA|1|23S1|U|1883
7ZTA|1|23S1|G|1884
7ZTA|1|23S1|A|1885
7ZTA|1|23S1|U|1886
7ZTA|1|23S1|C|1887
7ZTA|1|23S1|G|1888
7ZTA|1|23S1|A|1889
7ZTA|1|23S1|A|1890
7ZTA|1|23S1|G|1891

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain ETR1

Transfer RNA; tRNA