IL_7ZUW_077

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_077 not in the Motif Atlas

Homologous match to IL_4V88_464

Geometric discrepancy: 0.125

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7ZUW|1|2|G|1638
7ZUW|1|2|C|1639
7ZUW|1|2|C|1640
7ZUW|1|2|C|1641
*
7ZUW|1|2|G|1760
7ZUW|1|2|U|1761
7ZUW|1|2|A|1762
7ZUW|1|2|A|1763
7ZUW|1|2|C|1764

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain 6

Transfer RNA; tRNA

Chain Bm

60S ribosomal protein L41