IL_7ZUW_092
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- ACGCAGCGAAAUGCGAUACGU*AAUCU
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUW_092 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.0879
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
7ZUW|1|3|A|44
7ZUW|1|3|C|45
7ZUW|1|3|G|46
7ZUW|1|3|C|47
7ZUW|1|3|A|48
7ZUW|1|3|G|49
7ZUW|1|3|C|50
7ZUW|1|3|G|51
7ZUW|1|3|A|52
7ZUW|1|3|A|53
7ZUW|1|3|A|54
7ZUW|1|3|U|55
7ZUW|1|3|G|56
7ZUW|1|3|C|57
7ZUW|1|3|G|58
7ZUW|1|3|A|59
7ZUW|1|3|U|60
7ZUW|1|3|A|61
7ZUW|1|3|C|62
7ZUW|1|3|G|63
7ZUW|1|3|U|64
*
7ZUW|1|3|A|96
7ZUW|1|3|A|97
7ZUW|1|3|U|98
7ZUW|1|3|C|99
7ZUW|1|3|U|100
Current chains
- Chain 3
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BW
- 60S ribosomal protein L25
- Chain Bg
- 60S ribosomal protein L35-A
- Chain Bi
- 60S ribosomal protein L37-A
- Chain Bk
- 60S ribosomal protein L39
Coloring options: