IL_7ZUW_149
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 7ZUW|1|5|C|1197, 7ZUW|1|5|A|1303, 7ZUW|1|5|U|1306
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUW_149 not in the Motif Atlas
- Geometric match to IL_5TBW_052
- Geometric discrepancy: 0.0711
- The information below is about IL_5TBW_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53762.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7ZUW|1|5|G|1195
7ZUW|1|5|A|1196
7ZUW|1|5|C|1197
7ZUW|1|5|A|1198
7ZUW|1|5|C|1199
7ZUW|1|5|C|1200
7ZUW|1|5|A|1201
7ZUW|1|5|C|1202
7ZUW|1|5|A|1203
7ZUW|1|5|A|1204
7ZUW|1|5|A|1205
7ZUW|1|5|A|1206
*
7ZUW|1|5|U|1300
7ZUW|1|5|G|1301
7ZUW|1|5|A|1302
7ZUW|1|5|A|1303
7ZUW|1|5|A|1304
7ZUW|1|5|A|1305
7ZUW|1|5|U|1306
7ZUW|1|5|G|1307
7ZUW|1|5|G|1308
7ZUW|1|5|A|1309
7ZUW|1|5|U|1310
7ZUW|1|5|G|1311
7ZUW|1|5|G|1312
7ZUW|1|5|C|1313
7ZUW|1|5|G|1314
7ZUW|1|5|C|1315
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain BB
- 60S ribosomal protein L3
- Chain BF
- 60S ribosomal protein L7-A
- Chain BI
- RPL10 isoform 1
- Chain BN
- 60S ribosomal protein L16-A
- Chain Be
- 60S ribosomal protein L33-A
- Chain Bl
- 60S ribosomal protein L40-A
Coloring options: